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npj Vaccines

Springer Science and Business Media LLC

All preprints, ranked by how well they match npj Vaccines's content profile, based on 62 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit. Older preprints may already have been published elsewhere.

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HIV BG505 SOSIP.664 trimer with 3M-052-AF/alum induces human autologous tier-2 neutralizing antibodies

Hahn, W. O.; Parks, K. R.; Shen, M.; Ozorowski, G.; Janes, H.; Ballweber-Fleming, L.; Woodward-Davis, A.; Duplessis, C.; Tomei, M.; Dey, A. K.; Sagawa, Z. K.; De Rosa, S. C.; Seese, A.; Siddaramaiah, L. K.; Stamatatos, L.; Lee, W.-H.; Sewall, L. M.; Karlinsey, D.; Turner, H. L.; Rubin, V.; Furth, S.; MacPhee, K.; Duff, M.; Corey, L.; Keefer, M. C.; Edupuganti, S.; Frank, I.; Maenza, J.; Baden, L. R.; Hyrien, O.; Sanders, R. W.; Moore, J. P.; Ward, A. B.; Tomaras, G. D.; Montefiori, D. C.; Rouphael, N.; McElrath, M. J.

2024-05-09 hiv aids 10.1101/2024.05.08.24306957 medRxiv
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Stabilized trimers preserving the native-like HIV envelope structure may be key components of a preventive HIV vaccine regimen to induce broadly neutralizing antibodies (bnAbs). We evaluated trimeric BG505 SOSIP.664 gp140, formulated with a novel TLR7/8 signaling adjuvant, 3M-052-AF/Alum, for safety, adjuvant dose-finding and immunogenicity in a first-in-healthy adult (n=17), randomized, placebo-controlled trial (HVTN 137A). The vaccine regimen appeared safe. Robust, trimer-specific antibody, B-cell and CD4+ T-cell responses emerged post-vaccination. Five vaccinees developed serum autologous tier-2 nAbs (ID50 titer, 1:28-1:8647) after 2-3 doses targeting C3/V5 and/or V1/V2/V3 Env regions by electron microscopy and mutated pseudovirus-based neutralization analyses. Trimer-specific, B-cell-derived monoclonal antibody activities confirmed these results and showed weak heterologous neutralization in the strongest responder. Our findings demonstrate the clinical utility of the 3M-052-AF/alum adjuvant and support further improvements of trimer-based Env immunogens to focus responses on multiple broad nAb epitopes. KEY TAKEAWAY/TAKE-HOME MESSAGESHIV BG505 SOSIP.664 trimer with novel 3M-052-AF/alum adjuvant in humans appears safe and induces serum neutralizing antibodies to matched clade A, tier 2 virus, that map to diverse Env epitopes with relatively high titers. The novel adjuvant may be an important mediator of vaccine response.

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A SARS-CoV-2 spike ferritin nanoparticle vaccine protects against heterologous challenge with B.1.1.7 and B.1.351 virus variants in Syrian golden hamsters

Wuertz, K. M.; Barkei, E.; Chen, W.-h.; Martinez, E. J.; Naouar, I. E.; Jagodzinski, L.; Paquin-Proulx, D.; Gromowski, G. D.; Swafford, I.; Ganesh, A.; Dong, M.; Zeng, X.; Thomas, P. V.; Sankhala, R. S.; Hajduczki, A.; Peterson, C. E.; Kuklis, C. H.; Soman, S.; Wieczorek, L.; Zemil, M.; Anderson, A.; Darden, J.; Hernandez, H.; Grove, H.; Dussupt, V.; Hack, H.; de la Barrera, R. A.; Zarling, S. N.; Wood, J. F.; Froude, J. W.; Gagne, M. J.; Henry, A. R.; Mokhtari, E. B.; Mudvari, P.; Krebs, S. J.; Pekosz, A. S.; Currier, J. R.; Kar, S.; Porto, M.; Winn, A.; Radzyminski, K.; Lewis, M. G.; Vasan,

2021-06-16 immunology 10.1101/2021.06.16.448525 medRxiv
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The emergence of SARS-CoV-2 variants of concern (VOC) requires adequate coverage of vaccine protection. We evaluated whether a spike ferritin nanoparticle vaccine (SpFN), adjuvanted with the Army Liposomal Formulation QS21 (ALFQ), conferred protection against the B.1.1.7 and B.1.351 VOCs in Syrian golden hamsters. SpFN-ALFQ was administered as either single or double-vaccination (0 and 4 week) regimens, using a high (10 g) or low (0.2 g) immunogen dose. Animals were intranasally challenged at week 11. Binding antibody responses were comparable between high- and low-dose groups. Neutralizing antibody titers were equivalent against WA1, B.1.1.7, and B.1.351 variants following two high dose two vaccinations. SpFN-ALFQ vaccination protected against SARS-CoV-2-induced disease and viral replication following intranasal B.1.1.7 or B.1.351 challenge, as evidenced by reduced weight loss, lung pathology, and lung and nasal turbinate viral burden. These data support the development of SpFN-ALFQ as a broadly protective, next-generation SARS-CoV-2 vaccine.

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A recombinant protein SARS-CoV-2 candidate vaccine elicits high-titer neutralizing antibodies in macaques.

Baisa, G.; Rancour, D.; Mansfield, K.; Burns, M.; Martin, L.; Cunha, D.; Fischer, J.; Muecksch, F.; Hatziioannou, T.; Bieniasz, P.; Schomburg, F.; Luke, K.

2020-12-21 immunology 10.1101/2020.12.20.422693 medRxiv
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Vaccines that generate robust and long-lived protective immunity against SARS-CoV-2 infection are urgently required. We assessed the potential of vaccine candidates based on the SARS-CoV-2 spike in cynomolgus macaques (M. fascicularis) by examining their ability to generate spike binding antibodies with neutralizing activity. Antigens were derived from two distinct regions of the spike S1 subunit, either the N-terminal domain (NTD) or an extended C-terminal domain containing the receptor-binding domain (RBD) and were fused to the human IgG1 Fc domain. Three groups of 2 animals each were immunized with either antigen, alone or in combination. The development of antibody responses was evaluated through 20 weeks post-immunization. A robust IgG response to the spike protein was detected as early as 2 weeks after immunization with either protein and maintained for over 20 weeks. Sera from animals immunized with antigens derived from the RBD were able to prevent binding of soluble spike proteins to the ACE2 receptor, shown by in vitro binding assays, while sera from animals immunized with the NTD alone lacked this activity. Crucially, sera from animals immunized with the RBD but not the NTD had potent neutralizing activity against SARS-CoV-2 pseudotyped virus, with titers in excess of 10,000, greatly exceeding that typically found in convalescent humans. Neutralizing activity persisted for more than 20 weeks. These data support the utility of spike subunit-based antigens as a vaccine for use in humans.

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Intradermal-delivered DNA vaccine provides anamnestic protection in a rhesus macaque SARS-CoV-2 challenge model

Patel, A.; Walters, J.; Reuschel, E. L.; Schultheis, K.; Parzych, E.; Gary, E. N.; Maricic, I.; Purwar, M.; Eblimit, Z.; Walker, S. N.; Guimet, D.; Bhojnagarwala, P.; Doan, A.; Xu, Z.; Elwood, D.; Reeder, S. M.; Pessaint, L.; Kim, K. Y.; Cook, A.; Chokkalingam, N.; Finneyfrock, B.; Tello-Ruiz, E.; Dodson, A.; Choi, J.; Generotti, A.; Harrison, J.; Tursi, N. J.; Andrade, V. M.; Dia, Y.; Zaidi, F. I.; Anderson, H.; Lewis, M. G.; Muthumani, K.; Kim, J. J.; Kulp, D. W.; Humeau, L. M.; Ramos, S.; Smith, T. R.; Weiner, D. B.; Broderick, K. E.

2020-07-29 immunology 10.1101/2020.07.28.225649 medRxiv
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Coronavirus disease 2019 (COVID-19), caused by the SARS-CoV-2 virus, has had a dramatic global impact on public health, social, and economic infrastructures. Here, we assess immunogenicity and anamnestic protective efficacy in rhesus macaques of the intradermal (ID)-delivered SARS-CoV-2 spike DNA vaccine, INO-4800. INO-4800 is an ID-delivered DNA vaccine currently being evaluated in clinical trials. Vaccination with INO-4800 induced T cell responses and neutralizing antibody responses against both the D614 and G614 SARS-CoV-2 spike proteins. Several months after vaccination, animals were challenged with SARS-CoV-2 resulting in rapid recall of anti-SARS-CoV-2 spike protein T and B cell responses. These responses were associated with lower viral loads in the lung and with faster nasal clearance of virus. These studies support the immune impact of INO-4800 for inducing both humoral and cellular arms of the adaptive immune system which are likely important for providing durable protection against COVID-19 disease.

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Dosing and Serostatus Shape the Efficacy of Adenovirus, mRNA, and Protein Vaccines

Awakoaiye, B.; Li, S.; Sanchez, S.; Dangi, T.; Irani, N.; Arroyo, L.; Arellano, G.; Mohammadabadi, S.; Aid, M.; Penaloza-MacMaster, P.

2025-07-17 immunology 10.1101/2025.07.16.665159 medRxiv
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Despite the widespread use of adenovirus, mRNA, and protein-based vaccines during the COVID-19 pandemic, their relative immunological profiles and protective efficacies remain incompletely defined. Here, we compared antigen kinetics, innate and adaptive immune responses, and protective efficacy following Ad5, mRNA, and protein vaccination in mice. Ad5 induced the most sustained antigen expression, but mRNA induced the most potent interferon responses, associated with robust antigen presentation and costimulation. Unlike Ad5 vaccines, which were hindered by pre-existing vector immunity, mRNA vaccines retained efficacy after repeated use. As a single-dose regimen, Ad5 vaccines elicited superior immune responses. However, as a prime-boost regimen, and particularly in Ad5 seropositive mice, mRNA vaccines outperformed the other vaccine platforms. These findings highlight strengths of each vaccine platform and underscore the importance of host serostatus in determining optimal vaccine performance.

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Intranasal AAV Vaccination of SARS-CoV-2 Induce Strong and Sustained Neutralizing Antibodies in Mice

Ji, Y.; Di Pasquale, G.; Zheng, C.; Afione, S.; Esperanza, T.; Yin, H.; Burbelo, P. D.; Chiorini, J. A.

2025-03-14 immunology 10.1101/2025.03.14.640671 medRxiv
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The COVID-19 pandemic continues to pose significant health challenges, despite existing vaccines. This study evaluates the immunogenicity of recombinant adeno-associated viruses (AAV) expressing SARS-CoV-2 spike proteins, administered intramuscularly and intranasally in mice. Both delivery methods of AAV5-spike, AAV5-spike stabilized trimer as well as AAV44.9-spike elicited robust serum anti-spike antibodies within 8-12 weeks, with high levels of anti-spike antibodies sustained for over a year. Comparison of mouse serum antibodies 16 weeks post intramuscular or intranasal AAV5 administration demonstrated similar SARS-CoV-2 spike binding neutralizing activity in vitro. Analysis of changes in cellular immunity by ELISpot at 12 weeks post-AAV spike transduction revealed interferon-{gamma} induction in response to peptide challenge. Despite a decline in AAV vector DNA at the injection site, the persistence of anti-spike antibodies demonstrated that AAV-vectors can elicit lasting immune responses, highlighting nasal AAV administration as a potential strategy to block respiratory virus infections.

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Homologous and Heterologous Immunization with a PIV5-Based Modified OspA Vaccine Confers Equivalent Protection Against Tick-Transmitted Borrelia burgdorferi

Kundu, S.; Joyner, G.; Abil, O.; Sanches, M.; Gingerich, M.; Holloman, K.; Jin, H.; He, B.; Gomes-Solecki, M.

2026-03-04 microbiology 10.64898/2026.03.03.709130 medRxiv
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Vaccines targeting outer surface protein A (OspA) of Borrelia burgdorferi protect against Lyme disease by inducing antibodies in the host that neutralize spirochetes in the Ixodes scapularis tick midgut during engorgement before transmission occurs. We evaluated whether heterologous vaccination enhances protection compared to homologous delivery of the immunogen. C3H-HeN mice were immunized with a parainfluenza virus 5 vector (PIV5) containing a modified OspA protein (OspABPBPk) using three prime-boost immunization regimens: homologous PIV5 intranasal/intranasal (IN/IN), homologous rOspABPBPk (protein) subcutaneous/subcutaneous (SC/SC), or heterologous intranasal PIV5-ABPBPk/subcutaneous rOspABPBPk (IN/SC). Immunized mice were then challenged with nymphal I. scapularis ticks infected with 19 strains of B. burgdorferi three months post-prime vaccination. Three weeks after the last day of tick challenge, blood and tissues were collected from euthanized mice. All OspA-containing regimens elicited strong systemic IgG antibody responses that exceeded established protective thresholds. Vaccination markedly reduced B. burgdorferi loads in engorged nymphal ticks. Homologous IN/IN and SC/SC regimens produced the lowest geometric mean flaB burdens in nymphs (2.6 x 103 and 1.8 x 103 copies, respectively), corresponding to [~]1.8-2.0 log10 reductions relative to controls; the heterologous IN/SC regimen produced a more modest reduction ([~]1.7 log10; p = 0.0071 vs IN/IN, p = 0.0003 vs SC/SC). Across all vaccinated groups, no systemic infection with B. burgdorferi was observed as evidenced by absence of motile spirochetes in cultures from tissues, although one mouse (1/9, 11%) in the heterologous IN/SC regimen, had evidence of increased pepVF seroconversion and low-level flaB DNA in culture. Thus, homologous regimens yielded more consistent protective immunity with absent of signs of B. burgdorferi dissemination, suggesting that high systemic anti-OspABPBPk IgG antibody titers, rather than alternate immunization routes, were associated with the most consistent protection outcomes. PIV5-ABPBPk is a promising vaccine candidate for development of next-generation homologous or heterologous human Lyme disease vaccines.

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Comparable safety and humoral immunogenicity of delayed versus delayed fractional boosting with blood-stage malaria RH5.1/Matrix-M vaccine

Holliday, K.; Nielsen, C. M.; Roberts, T. W.; Baker, E. C.; Marshall, B.; Jarman, C.; Odongo, I.; Salkeld, J.; Diouf, A.; Marchevsky, N. G.; Ashfield, R.; King, L. D. W.; Cowan, R. E.; Lata, P.; Nugent, F. L.; Cho, J.-S.; Carnot, C.; Long, C. A.; Hope, P.; Schutter, J.; Kay, L.; Winks, T.; Skinner, K.; Silk, S. E.; Draper, S. J.; Minassian, A. M.; Payne, R. O.

2026-04-11 infectious diseases 10.64898/2026.04.10.26348898 medRxiv
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An efficacious blood-stage malaria vaccine would serve as a highly useful public health tool alongside licensed vaccines targeting the pre-erythrocytic life cycle stage of the Plasmodium falciparum parasite. RH5 is the leading blood-stage malaria vaccine candidate antigen due to its highly-conserved sequence and non-redundant role in merozoite invasion of red blood cells. Following encouraging immunogenicity data in UK and Tanzanian Phase Ia/b vaccine trials, RH5-based vaccines have progressed to Phase IIb evaluation in Burkina Faso in recent years. Here, we report a Phase Ia clinical trial in malaria-naive UK adults to assess the safety and immunogenicity of the malaria vaccine candidate RH5.1 soluble protein with Matrix-M adjuvant using two different booster dosing regimens: 10-10-10 micrograms versus 50-50-10 micrograms RH5.1, both delivered in a 0-1-6-month schedule with 50 micrograms Matrix-M adjuvant per dose (ClinicalTrials.gov NCT06141057). A total of n=24 participants were recruited to this study, with n=23 completing all follow-up visits through to 1 year following final vaccination. The RH5.1/Matrix-M formulation was well-tolerated in this population, with injection site pain, myalgia and fatigue being the most commonly reported symptoms up to 7 days post-vaccination. There were no serious adverse events, adverse events of special interest, or suspected unexpected serious adverse reactions reported over the course of the trial. Both vaccination regimens were similarly immunogenic; no differences were observed in peak anti-RH5.1 serum IgG concentrations, in vitro functional anti-parasitic activity, avidity, or durability. Our findings build on other observations from clinical trials of adjuvanted RH5.1 indicating that humoral immunogenicity can be enhanced by delaying the final booster vaccination, but that there is limited impact of fractionation of the final dose. These insights can help to guide the next steps of multi-antigen, multi-stage malaria vaccine development in malaria-endemic settings.

9
Vi polysaccharide and conjugated vaccines afford similar early, IgM or IgG-independent control of infection but boosting with conjugated Vi vaccines sustains the efficacy of immune responses

Jossi, S. E.; Arcuri, M.; Alshayea, A.; Persaud, R. R.; Marcial-Juarez, E.; Palmieri, E.; Di Benedetto, R.; Perez-Toledo, M.; Pillaye, J.; Channell, W. M.; Schager, A. E.; Lamerton, R. E.; Cook, C. N.; Goodall, M.; Hanaeda, T.; Baumler, A. J.; Jackson-Jones, L. H.; Toellner, K.-M.; Maclennan, C.; Henderson, I. R.; Micoli, F.; Cunningham, A. F.

2023-01-03 immunology 10.1101/2023.01.03.522561 medRxiv
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Vaccination with Vi capsular polysaccharide (Vi-PS) or protein-Vi typhoid conjugate vaccine (TCV) can protect adults against Salmonella Typhi infections. TCVs offer better protection than Vi-PS in infants and may offer better protection in adults. Potential reasons for why TCV may be superior in adults are not fully understood. Here, we immunized wild-type (WT) mice and mice deficient in IgG or IgM with Vi-PS or TCVs (Vi conjugated to tetanus toxoid or CRM197) for up to seven months, with and without subsequent challenge with Vi-expressing Salmonella Typhimurium. Unexpectedly, IgM or IgG alone were similarly able to reduce bacterial burdens in tissues, and this was observed in response to conjugated or unconjugated Vi vaccines and was independent of antibody being of high affinity. Only in the longer-term after immunization (>5 months) were differences observed in tissue bacterial burdens of mice immunized with Vi-PS or TCV. These differences related to the maintenance of antibody responses at higher levels in mice boosted with TCV, with the rate of fall in IgG titres induced to Vi-PS being greater than for TCV. Therefore, Vi-specific IgM or IgG are independently capable of protecting from infection and any superior protection from vaccination with TCV in adults may relate to responses being able to persist better rather than from differences in the antibody isotypes induced. These findings suggest that enhancing our understanding of how responses to vaccines are maintained may inform on how to maximize protection afforded by conjugate vaccines against encapsulated pathogens such as S. Typhi.

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Virus-like particle-based vaccines targeting the Anopheles mosquito salivary protein, TRIO

Francian, A.; Flores-Garcia, Y.; Powell, J. R.; Petrovsky, N.; Zavala, F.; Chackerian, B.

2024-09-07 immunology 10.1101/2024.09.05.611467 medRxiv
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Malaria is a highly lethal infectious disease caused by Plasmodium parasites. These parasites are transmitted to vertebrate hosts when mosquitoes of the Anopheles genus probe for a blood meal. Sporozoites, the infectious stage of Plasmodium, transit to the liver within hours of injection into the dermis. Vaccine efforts are hindered by the complexity of the parasites lifecycle and the speed at which the infection is established in the liver. In an effort to enhance immunity against Plasmodium, we produced a virus-like particle (VLP)-based vaccine displaying an epitope of TRIO, an Anopheles salivary protein which has been shown to enhance mobility and dispersal of sporozoites in the dermis. Previous work demonstrated that passive immunization with TRIO offered protection from liver infection and acted synergistically with a Plasmodium targeted vaccine. Immunization of mice with TRIO VLPs resulted in high-titer and long-lasting antibody responses that did not significantly drop for over 18 months post-immunization. TRIO VLPs were similarly immunogenic when combined with an anti-malaria vaccine targeting the L9 epitope of the Plasmodium falciparum circumsporozoite protein.However, when used in a malaria challenge mouse model, TRIO VLPs only provided modest protection from infection and did not boost the protection provided by L9 VLPs.

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Correlates of protection against African swine fever virus identified by a systems immunology approach

Lotonin, K.; Brito, F.; Mehinagic, K.; Garcia-Nicolas, O.; Liniger, M.; Donze, N.; Python, S.; Talker, S.; Ploegaert, T.; Ruggli, N.; Benarafa, C.; Summerfield, A.

2026-01-05 immunology 10.1101/2025.05.25.655978 medRxiv
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African swine fever virus (ASFV) causes a fatal hemorrhagic disease in domestic pigs and wild boars, which poses severe threats to the global pork industry. Despite the promise of live attenuated vaccines (LAVs), their narrow margin between efficacy and residual virulence presents major safety challenges. This study bridges a critical knowledge gap in ASF vaccinology by identifying innate and adaptive correlates of protection. This was achieved by using an established model with two groups of pigs differing in baseline immunological status (farm and specific pathogen-free [SPF]). The animals were immunized with an attenuated ASFV strain and subsequently challenged with a related, highly virulent genotype II strain. By applying a systems immunology approach, we correlated kinetic data, including serum cytokines, blood transcription modules (BTMs), T-cell responses, and antibody levels, with clinical outcomes to track protective and detrimental immune responses to the virus over time. Key innate correlates of protection included early and sustained IFN- response, activation of antigen presentation BTMs, and controlled IL-8 levels during immunization. Lower baseline immune activation observed in SPF pigs in steady state was linked to increased protection. Adaptive correlates encompassed cell cycle, plasma cell, and T-cell BTM responses lasting until day 15 post-immunization. Consequently, an effective response from ASFV-specific Th cells prior to challenge indicated protection. After the challenge, an early IFN- response, along with low levels of pro-inflammatory cytokines and a strong induction of memory Th and Tc cells, correlated with improved clinical outcomes. The model highlights the critical role of host-specific factors in vaccine efficacy and provides a valuable framework for optimizing ASFV vaccine design while distinguishing between protective and detrimental immune responses.

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Optimization of Non-Coding Regions Improves Protective Efficacy of an mRNA SARS-CoV-2 Vaccine in Nonhuman Primates

Gebre, M.; Rauch, S.; Roth, N.; Yu, J.; Chandrashekar, A.; Mercado, N.; He, X.; Liu, J.; McMahan, K.; Martinot, A.; Giffin, T.; Hope, D.; Patel, S.; Sellers, D.; Sanborn, O.; Barrett, J.; Liu, X.; Cole, A.; Pessaint, L.; Valentin, D.; Flinchbaugh, Z.; Yalley-Ogunro, J.; Muench, J.; Brown, R.; Cook, A.; Teow, E.; Andersen, H.; Lewis, M. G.; Mueller, S.; Petsch, B.; Barouch, D. H.

2021-08-16 immunology 10.1101/2021.08.13.456316 medRxiv
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The CVnCoV (CureVac) mRNA vaccine for SARS-CoV-2 has recently been evaluated in a phase 2b/3 efficacy trial in humans. CV2CoV is a second-generation mRNA vaccine with optimized non-coding regions and enhanced antigen expression. Here we report a head-to-head study of the immunogenicity and protective efficacy of CVnCoV and CV2CoV in nonhuman primates. We immunized 18 cynomolgus macaques with two doses of 12 ug of lipid nanoparticle formulated CVnCoV, CV2CoV, or sham (N=6/group). CV2CoV induced substantially higher binding and neutralizing antibodies, memory B cell responses, and T cell responses as compared with CVnCoV. CV2CoV also induced more potent neutralizing antibody responses against SARS-CoV-2 variants, including B.1.351 (beta), B.1.617.2 (delta), and C.37 (lambda). While CVnCoV provided partial protection against SARS-CoV-2 challenge, CV2CoV afforded robust protection with markedly lower viral loads in the upper and lower respiratory tract. Antibody responses correlated with protective efficacy. These data demonstrate that optimization of non-coding regions can greatly improve the immunogenicity and protective efficacy of an mRNA SARS-CoV-2 vaccine in nonhuman primates.

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Molecular and functional properties of human Plasmodium falciparum CSP C-terminus antibodies

Oludada, O. E.; Costa, G.; Burn Aschner, C.; Obraztsova, A.; Prieto, K.; Canetta, C.; Hoffmann, S. L.; Kremsner, P.; Mordmueller, B.; Murugan, R.; Julien, J.-P.; Levashina, E. A.; Wardemann, H.

2023-01-19 immunology 10.1101/2023.01.19.524692 medRxiv
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Human monoclonal antibodies (mAbs) against the central repeat and junction domain of Plasmodium falciparum circumsporozoite protein (PfCSP) have been studied extensively to guide malaria vaccine design compared to antibodies against the PfCSP C terminus. Here, we describe the molecular characteristics and protective potential of a panel of 73 germline and mutated human mAbs against the highly immunogenic PfCSP C-terminal domain. Two mAbs recognized linear epitopes in the C-terminal linker with sequence similarity to repeat and junction motifs, whereas all others targeted conformational epitopes in the -thrombospondin repeat (-TSR) domain. Specificity for the polymorphic Th2R/Th3R but not the conserved RII+ region in the -TSR was associated with IGHV3-21/IGVL3-21 or IGLV3-1 gene usage. Although the C terminus specific mAbs showed signs of more efficient affinity maturation and class-switching compared to anti-repeat mAbs, parasite inhibitory activity was limited to a single C-linker reactive mAb with cross-reactivity to the central repeat and junction. The data provide novel insights in the human anti-C-linker and anti--TSR antibody response that support exclusion of the PfCSP C terminus from malaria vaccine designs.

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Stabilized Full-Length Measles Fusion Protein Elicits Potent Immunity and Protection In Vivo

Zyla, D. S.; Zipursky, G.; Marca, R. D.; Lacarbonara, D.; Niemeyer, G.; Peng, W.; Predella, C.; Stearns, K.; Leedale, C.; Miller, J.; Tay, D.; Kao, J.; Acciani, M.; Clemente, L. D.; Das, A.; Parekh, D.; Avalos, R. D.; McGill, G.; Dorrello, N. V.; Hastie, K. M.; Alabi, C. A.; Snijder, J.; Moscona, A.; Greninger, A. L.; Niewiesk, S.; Saphire, E. O.; Porotto, M.

2025-10-09 immunology 10.1101/2025.10.07.681039 medRxiv
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Measles virus (MeV) is a highly contagious pathogen that causes significant morbidity and mortality in populations with low vaccination coverage. Infection typically leads to immune amnesia and, in rare cases, fatal neurological disease. While current live-attenuated vaccines are highly effective, they primarily elicit neutralizing antibodies against the hemagglutinin (H) glycoprotein, with a less robust response to the fusion (F) protein, a key protein for viral entry. To improve the immunogenicity of the F protein, we designed and characterized stabilized, prefusion MeV F protein antigens. We engineered both soluble ectodomains (FECTO) and full-length, membrane-embedded proteins (FFL) with mutations that confer thermal stability. Cryo-electron microscopy confirmed that these engineered antigens faithfully maintain the native prefusion conformation. When evaluated in a cotton rat model, immunization with either FECTO or FFL constructs induced neutralizing antibodies and elicited protection against viral challenge. The most stable full-length construct (FFL 3M) elicited a more potent neutralizing antibody response than its ectodomain counterpart. Importantly, no evidence of vaccine-enhanced respiratory disease was observed. These findings establish that a thermostable, full-length F protein is a superior immunogen to its soluble ectodomain. This work presents a promising candidate for next-generation, non-replicating measles vaccines intended to complement current vaccination strategies and provide a safe option for immunocompromised individuals and others who cannot receive live-virus vaccines. One-Sentence SummaryA prefusion-stabilized, full-length measles Fusion glycoprotein immunogen induces strong neutralizing responses and offers protection against challenge with wild-type virus.

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Immunogenicity and tolerability of booster typhoid conjugate vaccine (TCV) five to six years after initial dose in Burkinabe Children

Sawadogo, J. W.; Hema, A.; Diarra, A.; Kabore, J. M.; Hien, D.; Kouraogo, L.; Zou, A. R.; Ouedraogo, A. Z.; Tiono, A. B.; Datta, S.; Pasetti, M. F.; Neuzil, K. M.; Sirima, S. B.; Ouedraogo, A.; Laurens, M. B.

2026-04-21 public and global health 10.64898/2026.04.19.26351224 medRxiv
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Typhoid fever remains a significant public health challenge in low- and middle-income countries. In 2018, The World Health Organization recommended a single dose typhoid conjugate vaccine (TCV) for routine immunization in endemic settings; however, evidence guiding booster doses remains limited. Homologous TCV booster doses have demonstrated immune boosting. This study assessed the immunogenicity and safety of a heterologous booster using a Vi capsular polysaccharide-CRM197 TCV (Vi-CRM) administered 5-6 years after primary vaccination with a Vi capsular polysaccharide tetanus toxoid TCV (Vi-TT) in children. Children previously enrolled in a Phase 2 trial were recruited. Participants who had received TCV at 9-11 or 15-23 months were given a Vi-CRM booster at 6-7 years of age (Booster-TCV group), and controls received their first TCV dose at the same age (1st-TCV group). Serum anti-Vi IgG concentrations were measured at baseline and 28 days post-vaccination. Solicited and unsolicited adverse events (AEs) and serious adverse events (SAEs) were recorded. Among 147 children enrolled, 87 received a second and 60 received a first TCV dose. Baseline anti-Vi IgG geometric mean titers (GMT) were higher in the Booster-TCV group (21.5 EU/mL; 95% CI: 17.2-26.8) than in the 1st-TCV group (5.5 EU/mL; 95% CI: 4.5-6.7). At day 28, GMTs rose markedly in both groups: 5140.0 EU/mL (95% CI: 4302.0-6141.3) in the Booster-TCV group and 2084.8 EU/mL (95% CI: 1724.4-2520.5) in the 1st-TCV group. Local reactions and systemic AEs were mild. No SAEs were observed. Vi-TT-induced immunity persisted for at least 5-6 years, and a heterologous booster triggered a strong immune response with universal seroconversion. These findings support heterologous prime-boost strategies to maintain protection in school-age children and inform optimization of TCV schedules in endemic regions.

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Design, immunogenicity and efficacy of a Pan-SARS-CoV-2 synthetic DNA vaccine

Reed, C. C.; Schultheis, K.; Andrade, V. M.; Kalia, R.; Tur, J.; Schouest, B.; Elwood, D.; Walters, J. N.; Maricic, I.; Doan, A.; Vazquez, M.; Eblimit, Z.; Pezzoli, P.; Amante, D.; Porto, M.; Narvaez, B.; Lok, M.; Spence, B.; Bradette, H.; Horn, H.; Yang, M.; Fader, J.; Ferrer, R.; Weiner, D. B.; Kar, S.; Kim, J. J.; Humeau, L. M.; Ramos, S. J.; Smith, T. R.; Broderick, K. E.

2021-08-04 immunology 10.1101/2021.05.11.443592 medRxiv
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Here we have employed SynCon(R) design technology to construct a DNA vaccine expressing a pan-Spike immunogen (INO-4802) to induce broad immunity across SARS-CoV-2 variants of concern (VOC). Compared to WT and VOC-matched vaccines which showed reduced cross-neutralizing activity, INO-4802 induced potent neutralizing antibodies and T cell responses against WT as well as B.1.1.7, P.1, and B.1.351 VOCs in a murine model. In addition, a hamster challenge model demonstrated that INO-4802 conferred superior protection following intranasal B.1.351 challenge. Protection against weight loss associated with WT, B.1.1.7, P.1 and B.1.617.2 challenge was also demonstrated. Vaccinated hamsters showed enhanced humoral responses against VOC in a heterologous WT vaccine prime and INO-4802 boost setting. These results demonstrate the potential of the pan-SARS-CoV-2 vaccine, INO-4802 to induce cross-reactive immune responses against emerging VOC as either a standalone vaccine, or as a potential boost for individuals previously immunized with WT-matched vaccines.

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Two-dose "extended priming" immunization amplifies humoral immune responses by synchronizing vaccine delivery with the germinal center response

Bhagchandani, S.; Yang, L.; Maiorino, L.; Ben-Akiva, E.; Rodrigues, K. A.; Romanov, A.; Suh, H.; Aung, A.; Wu, S.; Wadhera, A.; Chakraborty, A. K.; Irvine, D. J.

2023-11-21 immunology 10.1101/2023.11.20.563479 medRxiv
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"Extended priming" immunization regimens that prolong exposure of the immune system to vaccines during the primary immune response have shown promise in enhancing humoral immune responses to a variety of subunit vaccines in preclinical models. We previously showed that escalating-dosing immunization (EDI), where a vaccine is dosed every other day in an increasing pattern over 2 weeks dramatically amplifies humoral immune responses. But such a dosing regimen is impractical for prophylactic vaccines. We hypothesized that simpler dosing regimens might replicate key elements of the immune response triggered by EDI. Here we explored "reduced ED" immunization regimens, assessing the impact of varying the number of injections, dose levels, and dosing intervals during EDI. Using a stabilized HIV Env trimer as a model antigen combined with a potent saponin adjuvant, we found that a two-shot extended-prime regimen consisting of immunization with 20% of a given vaccine dose followed by a second shot with the remaining 80% of the dose 7 days later resulted in increased total GC B cells, 5-10-fold increased frequencies of antigen-specific GC B cells, and 10-fold increases in serum antibody titers compared to single bolus immunization. Computational modeling of the GC response suggested that this enhanced response is mediated by antigen delivered in the second dose being captured more efficiently as immune complexes in follicles, predictions we verified experimentally. Our computational and experimental results also highlight how properly designed reduced ED protocols enhance activation and antigen loading of dendritic cells and activation of T helper cells to amplify humoral responses. These results suggest that a two-shot priming approach can be used to substantially enhance responses to subunit vaccines.

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SARS-CoV-2 vaccination induces neutralizing antibodies against pandemic and pre-emergent SARS-related coronaviruses in monkeys

Saunders, K. O.; Lee, E.; Parks, R.; Martinez, D. R.; Li, D.; Chen, H.; Edwards, R. J.; Gobeil, S. M. C.; Barr, M.; Mansouri, K.; Alam, S. M.; Sutherland, L. L.; Cai, F.; Sanzone, A.; Berry, M.; Manne, K.; Kapingidza, A. B.; Azoitei, M.; Tse, L. V.; Scobey, T. D.; Spreng, R.; Rountree, R. W.; DeMarco, C. T.; Denny, T. N.; Woods, C. W.; Petzold, E. W.; Oguin, T. H.; Sempowski, G. D.; Gagne, M.; Douek, D. C.; Tomai, M. A.; Fox, C. B.; Seder, R.; Wiehe, K.; Weissman, D.; Pardi, N.; Acharya, P.; Andersen, H.; Lewis, M. G.; Moore, I. N.; Montefiori, D. C.; Baric, R. S.; Haynes, B. F.

2021-02-17 immunology 10.1101/2021.02.17.431492 medRxiv
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Betacoronaviruses (betaCoVs) caused the severe acute respiratory syndrome (SARS) and Middle East Respiratory Syndrome (MERS) outbreaks, and now the SARS-CoV-2 pandemic. Vaccines that elicit protective immune responses against SARS-CoV-2 and betaCoVs circulating in animals have the potential to prevent future betaCoV pandemics. Here, we show that immunization of macaques with a multimeric SARS-CoV-2 receptor binding domain (RBD) nanoparticle adjuvanted with 3M-052-Alum elicited cross-neutralizing antibody responses against SARS-CoV-1, SARS-CoV-2, batCoVs and the UK B.1.1.7 SARS-CoV-2 mutant virus. Nanoparticle vaccination resulted in a SARS-CoV-2 reciprocal geometric mean neutralization titer of 47,216, and robust protection against SARS-CoV-2 in macaque upper and lower respiratory tracts. Importantly, nucleoside-modified mRNA encoding a stabilized transmembrane spike or monomeric RBD protein also induced SARS-CoV-1 and batCoV cross-neutralizing antibodies, albeit at lower titers. These results demonstrate current mRNA vaccines may provide some protection from future zoonotic betaCoV outbreaks, and provide a platform for further development of pan-betaCoV nanoparticle vaccines.

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A mRNA-LNP vaccine against Dengue Virus elicits robust, serotype-specific immunity

Wollner, C. J.; Richner, M. C.; Hassert, M. A.; Pinto, A. K.; Brien, J. D.; Richner, J. M.

2021-01-06 microbiology 10.1101/2021.01.05.425517 medRxiv
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Dengue virus (DENV) is the most common vector-borne viral disease with nearly 400 million worldwide infections each year concentrated in the tropical and subtropical regions of the world. Severe dengue complications are often associated with a secondary heterotypic infection of one of the four circulating serotypes. In this scenario, humoral immune responses targeting cross-reactive, poorly-neutralizing epitopes can lead to increased infectivity of susceptible cells via antibody-dependent enhancement (ADE). In this way, antibodies produced in response to infection or vaccination are capable of contributing to enhanced disease in subsequent infections. Currently, there are no available therapeutics to combat DENV disease, and there is an urgent need for a safe and efficacious vaccine. Here, we developed a nucleotide-modified mRNA vaccine encoding for the membrane and envelope structural proteins from DENV serotype 1 encapsulated into lipid nanoparticles (prM/E mRNA-LNP). Vaccination of mice elicited robust antiviral immune responses comparable to viral infection with high levels of neutralizing antibody titers and antiviral CD4+ and CD8+ T cells. Immunocompromised AG129 mice vaccinated with the prM/E mRNA-LNP vaccine were protected from a lethal DENV challenge. Vaccination with either a wild-type vaccine, or a vaccine with mutations in the immunodominant fusion-loop epitope, elicited equivalent humoral and cell mediated immune responses. Neutralizing antibodies elicited by the vaccine were sufficient to protect against a lethal challenge. Both vaccine constructs demonstrated serotype specific immunity with minimal serum cross-reactivity and reduced ADE compared to a live DENV1 viral infection. IMPORTANCEWith 400 million worldwide infections each year, dengue is the most common vector-born viral disease. 40% of the worlds population is at risk with dengue experiencing consistent geographic spread over the years. With no therapeutics available and vaccines performing sub optimally, the need for an effective dengue vaccine is urgent. Here we develop and characterize a novel mRNA vaccine encoding for the dengue serotype 1 envelope and premembrane structural proteins that is delivered via a lipid nanoparticle. Our DENV1 prM/E mRNA-LNP vaccine induces neutralizing antibody and cellular immune responses in immunocompetent mice and protects an immunocompromised mouse from a lethal DENV challenge. Existing antibodies against dengue can enhance subsequent infections via antibody-dependent enhancement. Importantly our vaccine only induced serotype specific immune responses and did not induce ADE.

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Glycoengineering of the hepatitis C virus E2 glycoprotein leads to improved biochemical properties and enhanced immunogenicity

Kulakova, L.; Li, K. H.; Chiang, A. W. T.; Schwoerer, M. P.; Schoffelen, S.; Elkholy, K.; Chao, K. L.; Shahid, S.; Kumar, B.; Murray, N. B.; Archer-Hartmann, S.; Azadi, P.; Voldborg, B. G.; Marin, A.; Mariuzza, R. A.; Andrianov, A. K.; Ploss, A.; Lewis, N. E.; Toth, E. A.; Fuerst, T. R.

2025-04-07 immunology 10.1101/2025.04.02.646860 medRxiv
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An effective vaccine against hepatitis C virus (HCV) must elicit the production of broadly neutralizing antibodies (bnAbs) reproducibly against the E1E2 glycoprotein complex. Little is known about how glycan content affects this process. Ideally, glycans would maximize epitope exposure without compromising antigen stability or exposing new epitopes. However, typical recombinant vaccines contain considerable heterogeneity in glycan content, which can affect the antibody response and neutralization potency. Here we employed glycoengineered Chinese hamster ovary (geCHO) cell lines that impart nearly homogeneous glycosylation as a means to test how specific glycan features influence antigenicity and immunogenicity for the secreted HCV E2 ectodomain (sE2). Specific geCHO antigens exhibited a modest but reproducible increase in affinity for some mAbs relative to CHO- and HEK293-produced sE2. Surprisingly, one geCHO sE2 antigen failed to bind the CD81 receptor, indicating the potential for significant glycan effects on biochemical properties. We immunized mice with the four antigens and found the total antibody response to be the same for all groups. However, sera from one geCHO group exhibited a 7-fold improvement in neutralization against the homologous HCV pseudovirus and had the most mice whose sera exhibited neutralization activity against genotypes 1b, 2a, 2b, and 3. Further analysis identified beneficial and deleterious glycan features, and the glycan that correlated the most with decreased potency was relatively small. However, size was not the sole determinant of glycan-driven effects on the antibody response. In summary, glycan content impacts biochemical properties of antigens to varying degrees and such effects can influence immune response quality and uniformity.